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Function that writes a VCF intended for mutational signature analysis

Source: R/utils.R
write_processed_vcf.Rd

Function that writes a VCF intended for mutational signature analysis

Usage

write_processed_vcf(
  calls,
  sample_name = NULL,
  output_directory = NULL,
  vcf_fname = NULL
)

Arguments

calls

data frame with calls

sample_name

sample name

output_directory

Output directory for output file

vcf_fname

filename for VCF