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List of URLS and variant identifiers for variant/gene/protein domain databases

Usage

variant_db_url

Format

A data.frame with 6 rows and 5 columns that indicates URL's for various variant/gene databases and how to use PCGR annotation columns to generate variant links

  • name - Name encoding for variant/gene database

  • group_by_var - Which column should be used for grouping

  • url_prefix - URL prefix

  • link_key_var - Which column to be used as the key value in link

  • link_display_var - Which column to be used as the display variable in link