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Function that loads all evidence items from CIViC and CGI, and combines them in a unified data.frame

Usage

load_all_eitems(eitems_raw = NULL, alteration_type = "MUT", origin = "Somatic")

Arguments

eitems_raw

raw data frame with evidence items

alteration_type

type of alteration ('MUT','MUT_LOF','CNA')

origin

variant origin ('Germline','Somatic')

Value

all_eitems