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Function that removes copy number segments that go beyond chrosomal lengths for the given assembly

Source: R/cna.R
get_valid_chromosome_segments.Rd

Function that removes copy number segments that go beyond chrosomal lengths for the given assembly

Usage

get_valid_chromosome_segments(cna_segments_df, genome_assembly, bsg)

Arguments

cna_segments_df

genomic segments with CNA

genome_assembly

genome assembly (grch37/grch38)

bsg

BSgenome object