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Function that excludes genomic aberrations from non-nuclear chromosomes

Source: R/utils.R
get_ordinary_chromosomes.Rd

Function that excludes genomic aberrations from non-nuclear chromosomes

Usage

get_ordinary_chromosomes(vcf_df, chrom_var = "CHROM")

Arguments

vcf_df

data frame

chrom_var

variable name of chromosome in data frame

Value

vcf_df data frame with mutations from nuclear chromosomes only