Skip to contents

Function that matches clinical evidence items (CIVIC, CBMDB) against somatic cancer variants detected in tumor

Usage

get_clin_assocs_snv_indel(sample_calls, annotation_tags = NULL, eitems = NULL)

Arguments

sample_calls

data frame with sample variants

annotation_tags

list with annotation tags for display in report

eitems

data frame with clinical evidence items

Value

list