Reads the linx.svs.tsv file.
Examples
x <- system.file("extdata/tables/COLO829v003T.linx.svs.tsv", package = "linxreport")
(l <- linx_svs_read(x))
#> # A tibble: 98 × 19
#> vcfId svId clusterId clusterReason fragileSiteStart fragileSiteEnd
#> <chr> <chr> <chr> <chr> <chr> <chr>
#> 1 gridss47fb_14o 1 50 NA false false
#> 2 gridss59bf_42o 3 51 NA false false
#> 3 gridss83fb_62o 8 52 NA false false
#> 4 gridss89fb_288o 9 54 NA false false
#> 5 gridss89bf_110o 10 53 NA false false
#> 6 gridss133b_230b 15 47 PROXIMITY-121 false false
#> 7 gridss137bb_10o 16 57 PROXIMITY-17 false false
#> 8 gridss137fb_18… 17 57 PROXIMITY-16 false false
#> 9 gridss206bb_31o 20 25 MAJOR_ALLELE… false false
#> 10 gridss206f_226b 22 29 NA false false
#> # ℹ 88 more rows
#> # ℹ 13 more variables: isFoldback <chr>, lineTypeStart <chr>,
#> # lineTypeEnd <chr>, junctionCopyNumberMin <dbl>,
#> # junctionCopyNumberMax <dbl>, geneStart <chr>, geneEnd <chr>,
#> # localTopologyIdStart <chr>, localTopologyIdEnd <chr>,
#> # localTopologyStart <chr>, localTopologyEnd <chr>, localTICountStart <dbl>,
#> # localTICountEnd <dbl>