Line plot for SR, PR and SR + PR for BNDs — plot_bnd_sr_pr_tot_lines • gpgr

Plots the number of split reads (SR), paired end reads (PR), and their sum (tot) across all BNDs, sorted by tot.

Usage

plot_bnd_sr_pr_tot_lines(
  d,
  title = "SR, PR and SR + PR line plot for BNDs",
  subtitle = "Events are sorted by decreasing tot values."
)

Arguments

d: A data.frame with an SR_PR_alt column.
title: Main title of plot.
subtitle: Subtitle of plot.

Value

A ggplot2 plot object.

Examples

x <- system.file("extdata/sash/sv.prioritised.tsv", package = "gpgr")
d <- process_sv(x)$map
plot_bnd_sr_pr_tot_lines(d)
#> $p_all

#> 
#> $p_tier
#> `geom_line()`: Each group consists of only one observation.
#> ℹ Do you need to adjust the group aesthetic?

#>