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Read TSO TargetRegionCoverage File

Source: R/tso.R
tso_targetregcvg_read.Rd

Reads the TargetRegionCoverage.json.gz file output from the TSO500 workflow.

Usage

tso_targetregcvg_read(x)

Arguments

x

Path to file.

Value

tibble with the following columns:

  • ConsensusReadDepth

  • BasePair

  • Percentage

Examples

x <- system.file("extdata/tso/sample705.TargetRegionCoverage.json.gz", package = "dracarys")
d <- tso_targetregcvg_read(x)
tso_targetregcvg_plot(d, min_pct = 0)