Read TSO MSI JSON File

Reads msi.json.gz file output from the TSO500 workflow.

Usage

tso_msi_read(x)

Arguments

x

Path to file.

Examples

x <- system.file("extdata/tso/sample705.msi.json.gz", package = "dracarys")
tso_msi_read(x)
#> # A tibble: 1 × 6
#>   TotalMicrosatelliteSitesAssessed TotalMicrosatelliteS…¹ PercentageUnstableSi…²
#>                              <int>                  <int>                  <dbl>
#> 1                                0                      0                     NA
#> # ℹ abbreviated names: ¹​TotalMicrosatelliteSitesUnstable,
#> #   ²​PercentageUnstableSites
#> # ℹ 3 more variables: ResultMessage <chr>, ResultIsValid <chr>, SumJsd <dbl>