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Generate UMCCR RNAsum Report

Source: R/rmd.R
rnasum_rmd.Rd

Generates a UMCCR RNAsum HTML report. It does so with the following steps:

  1. copy the rmd into tmp/rnasum.Rmd

  2. render the rmd inside tmp/

  3. return the path to the output HTML

Usage

rnasum_rmd(out_file = NULL, quiet = FALSE, pars)

Arguments

out_file

Path to output HTML file (needs '.html' suffix).

quiet

Suppress printing during rendering.

pars

List of named parameters that override custom params specified within the Rmd's YAML front-matter.

Value

Path to rendered HTML report.