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Copy Number Subset Table

Usage

cn_subset(gene.mut = NULL, cn_data, expr_data.z, expr_data.perc)

Arguments

gene.mut

Tibble with gene and alterations, if PCGR was run.

cn_data

Tibble with gene and MeanCopyNumber

expr_data.z

Tibble with SYMBOL and z-score expr values.

expr_data.perc

Tibble with SYMBOL and percentile expr values.

Value

A tibble with Gene, CN, Diff_Perc, Diff_Z_score, and Alterations if PCGR was run.